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microarray data analysis raw data  (Danaher Inc)


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    Danaher Inc microarray data analysis raw data
    Microarray Data Analysis Raw Data, supplied by Danaher Inc, used in various techniques. Bioz Stars score: 94/100, based on 461 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+data+analysis+raw+data/GenePix+Microarray+Systems/pmc02075096-91-0-17
    Average 94 stars, based on 461 article reviews
    microarray data analysis raw data - by Bioz Stars, 2026-11
    94/100 stars

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    Related Articles

    Microarray:

    Article Title: Gene Expression of Rat Alveolar Type II Cells during Hyperoxia Exposure and Early Recovery
    Article Snippet: After the 2-step hybridizations, each of the hybridized slides was scanned twice with a laser confocal scanner, ScanArray Express (PerkinElmer Life and Analytical Sciences. .. Microarray data analysis Raw data were extracted from the DNA microarray hybridization images with GenePix Pro 4 (Axon Instruments, Inc. Union City, CA). .. Microarray data analysis Raw data were extracted from the DNA microarray hybridization images with GenePix Pro 4 (Axon Instruments, Inc. Union City, CA).

    Hybridization:

    Article Title: Gene Expression of Rat Alveolar Type II Cells during Hyperoxia Exposure and Early Recovery
    Article Snippet: After the 2-step hybridizations, each of the hybridized slides was scanned twice with a laser confocal scanner, ScanArray Express (PerkinElmer Life and Analytical Sciences. .. Microarray data analysis Raw data were extracted from the DNA microarray hybridization images with GenePix Pro 4 (Axon Instruments, Inc. Union City, CA). .. Microarray data analysis Raw data were extracted from the DNA microarray hybridization images with GenePix Pro 4 (Axon Instruments, Inc. Union City, CA).



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    Microarray analysis using mRNA from p16−/− BMDM compared to p16+/+ BMDM showed (A) decreased mRNA expression of classically activated macrophages-associated genes and (B) increased mRNA expression of alternatively activated macrophages-associated genes. Data is expressed as fold change relative to p16+/+ BMDM. (C) Differential gene expression in p16−/− BMDM relative to p16+/+ BMDM was correlated with the changes induced in IL-4-induced p16+/+ AAMφ. The figure shows 2log values of the probesets significantly (p<0.05) regulated only in p16−/− BMDM (red dots), only in IL-4-polarized p16+/+ AAMφ (green dots) and by both conditions (blue dots), compared to p16+/+ BMDM. The X-axis represents differences in gene expression induced by IL-4, whereas the Y-axis represents the effect of p16INKa-deficiency. These comparisons are depicted in the schematic representation of the protocol in the corresponding colors. Pearson Correlation analysis was done for probesets differentially expressed by both conditions (blue). (D) Heat map of p16+/+ BMDM, p16−/− BMDM, IL-4-polarized p16+/+ and p16−/− AAMφ gene expression profiles. Colors fluctuate from blue (poorly expressed) to green (intermediate expression) and yellow (high expression). Additional information regarding gene description, fold induction, and p-value can be found in Table S3.

    Journal: Blood

    Article Title: p16 INK4a deficiency promotes IL-4-induced polarization and inhibits proinflammatory signaling in macrophages

    doi: 10.1182/blood-2010-10-313106

    Figure Lengend Snippet: Microarray analysis using mRNA from p16−/− BMDM compared to p16+/+ BMDM showed (A) decreased mRNA expression of classically activated macrophages-associated genes and (B) increased mRNA expression of alternatively activated macrophages-associated genes. Data is expressed as fold change relative to p16+/+ BMDM. (C) Differential gene expression in p16−/− BMDM relative to p16+/+ BMDM was correlated with the changes induced in IL-4-induced p16+/+ AAMφ. The figure shows 2log values of the probesets significantly (p<0.05) regulated only in p16−/− BMDM (red dots), only in IL-4-polarized p16+/+ AAMφ (green dots) and by both conditions (blue dots), compared to p16+/+ BMDM. The X-axis represents differences in gene expression induced by IL-4, whereas the Y-axis represents the effect of p16INKa-deficiency. These comparisons are depicted in the schematic representation of the protocol in the corresponding colors. Pearson Correlation analysis was done for probesets differentially expressed by both conditions (blue). (D) Heat map of p16+/+ BMDM, p16−/− BMDM, IL-4-polarized p16+/+ and p16−/− AAMφ gene expression profiles. Colors fluctuate from blue (poorly expressed) to green (intermediate expression) and yellow (high expression). Additional information regarding gene description, fold induction, and p-value can be found in Table S3.

    Article Snippet: We thank E. Vallez for mouse breeding, J. Brozek (Genfit SA, Loos, France) for microarray raw data analysis, T. Coevoet, N. Jouy and A. Lucas for technical assistance.

    Techniques: Microarray, Expressing, Gene Expression

    Representation of the relative microarray intensity values from a selection of down-regulated genes in p16+/+ and p16−/− BMDM with or without polarization (AAMφ) by 15 ng/mL IL-4 from day 0 of differentiation. Statistically significant differences are indicated (a: p<0.05 compared to p16+/+ BMDM; b: p<0.05 compared to p16−/− BMDM; c: p<0.05 compared to p16+/+ AAMφ.)

    Journal: Blood

    Article Title: p16 INK4a deficiency promotes IL-4-induced polarization and inhibits proinflammatory signaling in macrophages

    doi: 10.1182/blood-2010-10-313106

    Figure Lengend Snippet: Representation of the relative microarray intensity values from a selection of down-regulated genes in p16+/+ and p16−/− BMDM with or without polarization (AAMφ) by 15 ng/mL IL-4 from day 0 of differentiation. Statistically significant differences are indicated (a: p<0.05 compared to p16+/+ BMDM; b: p<0.05 compared to p16−/− BMDM; c: p<0.05 compared to p16+/+ AAMφ.)

    Article Snippet: We thank E. Vallez for mouse breeding, J. Brozek (Genfit SA, Loos, France) for microarray raw data analysis, T. Coevoet, N. Jouy and A. Lucas for technical assistance.

    Techniques: Microarray, Selection

    Validation of DNA Microarray Results by qPCR

    Journal: Investigative Ophthalmology & Visual Science

    Article Title: Perimysial Fibroblasts of Extraocular Muscle, as Unique as the Muscle Fibers

    doi: 10.1167/iovs.08-2857

    Figure Lengend Snippet: Validation of DNA Microarray Results by qPCR

    Article Snippet: DNA Microarray Data Analysis Raw data from microarray scans were analyzed with microarray analysis software (GCOS 2.0; Affymetrix).

    Techniques: Biomarker Discovery, Microarray